Exploring the cell information vs gene expression on reduced dimensions
In this tab, users can visualise both cell information and gene
expression side-by-side on low-dimensional representions.
Subsetting cells
Select all groups
Deselect all groups
General graphics controls
Gene Expression in Each Condition
Cell information / gene expression violin plot / box plot
In this tab, users can visualise the gene expression or continuous cell information
across groups of cells (e.g. condition / cell types).
Subsetting cells
Select all groups
Deselect all groups
Toggle graphics controls
Multiple gene expressions bubbleplot / heatmap
In this tab, users can visualise the gene expression patterns of
multiple genes grouped by categorical cell information (e.g. condition / cell types).
The normalised expression are averaged, log-transformed and then plotted.
List of gene names
Subsetting cells
Select all groups
Deselect all groups
Toggle graphics controls
This tool was built on
ShinyCell